rs37054346 SNP Detail

Summary

• ID
  rs37054346
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115454957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCAGAGAC AATAGTGGGT
  CAGTGAGGGA GCAGACACAC CCTGACCAGA GATCTGGCTG TAATTATGCA TAACACACAC
  ACACACACAC ACACACACAC ACACACACAC GCTACCCTCC CCCACCCCCC TGTTCCTCGG
  AAGGTGGACT TGGTTAATCC CAGGACCTCT TTGTCCCTCT TCACATTTTG ACCATACTGC
  R
  TTGGCCACTG TTCCCTGTGT TTCGCTATGA CTTTTCTGTT TAATGAACCT ACTGAGGATG
  GATAGCTGAG CGGAGCATCT CAGGGCTGCC AGGGCCTGGG CTCTGACCCT AATAACTCTG
  CTAACATTTA GAGAGGACGG GAAACAGCCC AGTGTCATTA TACCTCATTT GACAGTGTGG
  CCCGACATCC TTGATAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50798472	NES14206640	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37054346					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50798472	NES14206640	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115454957 () rs orientation: forward

Symbol	Name	Function Class
Gm68175	predicted gene, 68175	within coordinates
Gm68176	predicted gene, 68176	781 bp downstream
n-R5s92	nuclear encoded rRNA 5S 92	711 bp downstream
Rr370673	regulatory region 370673	1591 bp downstream
Rr687898	regulatory region 687898	1454 bp distal