rs37063836 SNP Detail

Summary

• ID
  rs37063836
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:136803223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCT TTGGTTCTCT ACTTGTAAGA
  M
  CGTGCTCTTT AATTTTGAAT GAAGC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss51454451	NES13991581	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A		C	A	A	C
ss321998850	CHEV_6_136774746	CHEVERUD	SCREENING_POP	f	SNP									A					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs37063836					SNP	A	A	A	A	A	A	A	A	A	C	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51454451	NES13991581	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:136803223 () rs orientation: forward

Symbol	Name	Function Class
BC049715	cDNA sequence BC049715	1401 bp upstream
Cpgi18110	CpG island 18110	1344 bp proximal
Rr380176	regulatory region 380176	799 bp upstream
Rr640072	regulatory region 640072	1058 bp proximal
Rr640073	regulatory region 640073	1998 bp proximal
Tssr59337	transcription start site region 59337	1520 bp upstream
Tssr59338	transcription start site region 59338	1536 bp upstream
Tssr59339	transcription start site region 59339	1574 bp upstream
Tssr59340	transcription start site region 59340	1605 bp upstream
Tssr63834	transcription start site region 63834	192 bp upstream
Tssr63835	transcription start site region 63835	129 bp upstream
Tssr63836	transcription start site region 63836	1489 bp downstream
Tssr63837	transcription start site region 63837	1522 bp downstream
Tssr63838	transcription start site region 63838	1541 bp downstream
Tssr63839	transcription start site region 63839	1595 bp downstream
Tssr63840	transcription start site region 63840	1826 bp downstream
Tssr63841	transcription start site region 63841	1899 bp downstream
Tssr63842	transcription start site region 63842	1961 bp downstream
Wbp11	WW domain binding protein 11	within coordinates