rs37064762 SNP Detail

Summary

• ID
  rs37064762
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:30172131 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGGTCTTT CCCTGGGCTC
  TTGCTCTGTA GTCAGACCTA TATGTGCCTC TTCCCCCTGC CCCCCCCCCC CAGCCTACCA
  TTCTCAGTAC CAGAGCTCCC TAGAGGTGAG TGGTTCGGGT GGAGTCTTTA GGGATCTTTT
  GCTAACATTC AGCAACTGTC ACCATCAACC CCTACACATC GAATCTAGAG TCTCTGTTGC
  R
  AATCTTCCCA CCAGCGATTG GCCCAGCACG GATCACTTAT ATCTCCATCG AATGCTGCAA
  AGGCTGGGGC GGCTAGCCTC TCCACTAGCT CAGGGCGTGG CCCAGCCTCC TGGTTGGCTA
  GTGAAATCTT AGGAGCCCCT CAAGCTGCTT TTGATGCAGT CCAAGCTACC CAGGCATGCA
  CCAAACTCGA GTGTGCTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51574671	NES14856883	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37064762					SNP	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51574671	NES14856883	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:30172131 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17248	CpG island 17248	784 bp proximal
Mirc35hg	microRNA cluster 35, host gene	within coordinates
Rncr4	retina expressed non-coding RNA 4	761 bp upstream
Rr146072	regulatory region 146072	1730 bp distal
Rr146073	regulatory region 146073	130 bp distal
Rr146074	regulatory region 146074	69 bp proximal
Tssr55327	transcription start site region 55327	728 bp upstream
Tssr60107	transcription start site region 60107	1944 bp downstream
Tssr60108	transcription start site region 60108	1968 bp downstream
Tssr60109	transcription start site region 60109	1985 bp downstream