rs37066053 SNP Detail

Summary

• ID
  rs37066053
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:87017893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAATAAAA AGGGGGGTAG
  TTTTGATCAA AATTTGTATG TTGCATAATT ATAATTCAGT TTAAATTAAA CAATCATGCA
  ATCCACACTG TGATTTCTCC TTTCACCTAA ATGCTATTAG ATATATCTTG TTTACTTTAA
  AAATATTTTG TATTATTTTC TTGTTCTTTT AATGTCCAGA TTTCCAACTT ATTTCCTTTG
  Y
  CACTCACTGT AGCTCAATCT TTGATTTTTT TTTTCCAAAA AAGTTAGCAT ATGGACTAGA
  AAATTATTCC TAGATACATA TGACACCTCC TATCATAGGG GAAGTAAGAC AGTTATCGGT
  ACTTTTTAAA AACCATGCCT GATCACTGAA ACCAACAAAA TTACTAGACA TGTTTGAGTT
  TAGAGTTGTA AAACTCCCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss50555440	NES13667366	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs37066053					SNP	T	T	T	T	C	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50555440	NES13667366	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:87017893 () rs orientation: forward

Symbol	Name	Function Class
Rr394020	regulatory region 394020	691 bp upstream