rs37070525 SNP Detail

Summary

• ID
  rs37070525
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44889965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTAGCTTA TCTTCCCTTC
  CTCCTGTGGG GTCTGGGATG GAACACCGTT TGGTGGCACA TCTGGGCCTC TCATTTGCCA
  GTTTTTAATT CTTATCTGCT GTCCTTAAAA TCCCTAATTG GCCTTTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTTTAT TTTGCTCCTG AAAGGGAGGC
  R
  TTTAGTAATT AACAGTGGTT TGAAATCAAC ACGGAATAAT TGTGAAGATT AAGTCTTTGC
  ACCATTTCTG CCTGTGGCAT CAAGGAATCA AAGCACTGGG GTCACACAGG GGTGGAAGGC
  TGCGCCCAGA GGCAAAGGCG CTGCGGCGCA CGCGCAGTCA GAAGCTGCGA GCACGTGTAT
  GTGCACGCGC ACCGGAAGCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51480356	NES13971394	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37070525					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51480356	NES13971394	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44889965 () rs orientation: forward

Symbol	Name	Function Class
Cd37	CD37 antigen	1426 bp upstream
Cpgi19038	CpG island 19038	29 bp proximal
Rr380753	regulatory region 380753	within coordinates
Slc6a16	solute carrier family 6, member 16	544 bp upstream
Tssr66503	transcription start site region 66503	533 bp upstream
Tssr66504	transcription start site region 66504	568 bp upstream
Tssr72351	transcription start site region 72351	1785 bp upstream
Tssr72352	transcription start site region 72352	1677 bp upstream
Tssr72353	transcription start site region 72353	1475 bp upstream
Tssr72354	transcription start site region 72354	1438 bp upstream
Tssr72355	transcription start site region 72355	1408 bp upstream
Tssr72356	transcription start site region 72356	1254 bp upstream
Tssr72357	transcription start site region 72357	1246 bp upstream
Tssr72358	transcription start site region 72358	1221 bp upstream
Tssr72359	transcription start site region 72359	1191 bp upstream
Tssr72360	transcription start site region 72360	1154 bp upstream
Tssr72361	transcription start site region 72361	1131 bp upstream