rs37075327 SNP Detail

Summary

• ID
  rs37075327
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:19917084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACCGTGGT CATCTGTTGT
  TCTACATCAA AGCAGGCAGT AAACGCAGTT GCTGAAACCA GAACTATCCT AGCCCAACCG
  TCAACACAGT CATGAGTGGG GTCATGAGTG GAGGGACAAG TTCAAGCCTT GCACTGAGGG
  CTCAAGAAGC CCATCAGCCA AGATGCAGAG TCCTGATAAG TTAAGCCTGT GAGCTCAAAC
  R
  GACATTGTCT CCACAGTGGG GCAGATTCAA AACAGAGATT TTCGTTTTCA CTCCCAACGA
  CTTATTAGCA AAGTTAAAAT GTAAACCGCA GAGGGATTTT TCCAGAGCTG TTTCTCATCC
  TTCTTTTTGG TACCACCCCA AATGTTCTGT ACTCAGAATA AGAACAGAAT AGGGAAATAC
  TTTCTGGACA GCTTTCTCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51072307	NES14365075	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A		G	G	G	G		G
ss324279230	CHEV_13_19824783	CHEVERUD	SCREENING_POP	f	SNP										A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37075327					SNP	G	G	G	G	G	G	G	G	A	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51072307	NES14365075	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:19917084 () rs orientation: forward

Symbol	Name	Function Class
Gpr141b	G protein-coupled receptor 141B	within coordinates
Tssr121608	transcription start site region 121608	159 bp upstream
Tssr121609	transcription start site region 121609	99 bp upstream
Tssr121610	transcription start site region 121610	15 bp downstream