rs37076344 SNP Detail

Summary

• ID
  rs37076344
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:96038068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ACAGTGAAAC AGGCTGGGGT GAACCCAGCA GTTATCCCTA
  CCCTAATGTG GCCGGGTCAC CTCTATAGAG CCCCAGTTCT GACATTTTCC AAGATGCTTG
  K
  CTTATGTGGC TGCCATAGAG ACCCAGGGAA TAGATGTCCA GTGCCTAGGG ATCCTGGCAG
  CCTGTGTTGC CCAGGGTTAC CAGGAGCTTC GTCCTCACAA T                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51973181	NES14989937	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	T	G	T	G	G	T	G	T	G	G	T
ss144591579	ENSMUSSNP2625680	ENSEMBL	ENSEMBL_Sanger	r	SNP			C
ss145642373	ENSMUSSNP3263827	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37076344					SNP	G	G	G	G	G	T	G	T	G	G	T	G	T	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51973181	NES14989937	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:96038068 () rs orientation: forward

Symbol	Name	Function Class
Rr178911	regulatory region 178911	1333 bp proximal
Rr185768	regulatory region 185768	1466 bp proximal
Rr191307	regulatory region 191307	within coordinates
Spmip8	sperm microtubule inner protein 8	80 bp upstream
Tssr2665	transcription start site region 2665	142 bp upstream
Tssr2666	transcription start site region 2666	156 bp upstream
Tssr2667	transcription start site region 2667	196 bp upstream