rs37076633 SNP Detail

Summary

• ID
  rs37076633
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:84564911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCACCTCC CAGCTCTCTG
  TTTGTTTATT TCCTTCCTCC GGGTTTCTGA ACTGTAAGCT TCCCTGACAA GCCCCGCCTA
  TGGCCCAAGG CTACACTGCT TCCTCCTTTC TTTCTCCCTT TTATTTTGGT GTGGGGGTGG
  AGCCCAGGGA TGTGTCACTG AGTATTATCC TACAGCCCCC TGGTAGCCCT GCTTCACCTC
  R
  GTGACACTCA GCTGTTTGTC TGCTCTGCTC ACTGTCTTCC ATTCATAGCC AGCCACAGCT
  ACTGCGTTCT TCTCATTTCC AGAGTTTTGT GATGGTGGGC AGGCTCGAGA ACCTGACTCC
  AGGTCAAGAT GGCTCGGCTT GCGAAGGTGC TTGCCGCAAA GCCTGGAGAC CTGAATTAGG
  TTCCTGGGAC TCATATGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss51563540	NES14676714	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G	G	G	G	G	G	G
ss135427403	ENSMUSSNP3781339	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs37076633					SNP	A	A	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51563540	NES14676714	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84564911 () rs orientation: forward

Symbol	Name	Function Class
Gm37240	predicted gene, 37240	within coordinates
Rr68541	regulatory region 68541	1511 bp distal
Rr68542	regulatory region 68542	490 bp proximal
Rr68543	regulatory region 68543	1290 bp proximal
Rr76452	regulatory region 76452	1381 bp proximal