rs37080734 SNP Detail

Summary

• ID
  rs37080734
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:49316443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATATCTGA CTTTGTTTGG
  CATTGAATCA ACACACCCTT CTATCTAACT CTTTTAGATA CTTTATGAAA ATTAAATACT
  TGTTCCAAAG CAACCATTCT TCACATTTTC CCAAACTTCT CACTGAAAGG TGCTACATTT
  GAATTATCCT AACAATGACC AGCCAAGATG ACACATACCT ATAATCTCAA ATACATGAGA
  M
  TCTGAGGCTT TACCCAACTG AAAGAAGAAG CTTACAAGTT TGAAACCTGC CTAAGCAACC
  CAGGAAATGA ATGTACTGAA GTGAAAATTT AAAGGCACTG GGAGATAGCT CAGAGTTATA
  ATTGTTTTCC TGCTTTTGTA AGTCCATGAG ATGAAATCCT AGTATCCCCC AATATGGTAA
  TGGATAAATG AATAGATGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss51106686	NES13870532	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs37080734					SNP	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51106686	NES13870532	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:49316443 () rs orientation: forward

Symbol	Name	Function Class
Kcnip4	Kv channel interacting protein 4	within coordinates
Tssr50938	transcription start site region 50938	271 bp downstream