rs37086802 SNP Detail

Summary

• ID
  rs37086802
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:92131911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCAGAATC TTTGAAGGCA
  TGACCTAATG TAGTTTCAGC TCGGTGACTC TTCTCGGGCT GTAATTTAAG AAGCACCGCT
  TTACTAAACA AAACAGATGC TGATTTTTCT GGTGAGTGAG CCGCACAGTT CAAACCAAAC
  CTGAATGTTT TCTAGTTAAG GGTGGTACTT TTTCACAGAC TGTAGTAAAA AGAAAGCAAA
  R
  ACTGCTACCA GCAAACGGCG TGAAACGGTT ATATAAAACC CATAAGATTT TTAAAAAGAG
  GAGAGAAATC TGCTAGGAAA GAGATCAACA AACTTGAAAG TGCAAACAGG GCTGATGGAA
  CAGATGTGGT AATCGATGCA TACTTAAGAA AGTGTGCAAA GCAGGAAAGT AAGTTTGAGG
  AAGCCCGATT TCCCGCACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	NZW/LacJ	PWD/PhJ
ss52034769	NES15054979	PERLEGEN	MM_PANEL2	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	NZW/LacJ	PWD/PhJ
rs37086802					SNP	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52034769	NES15054979	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:92131911 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22145	CpG island 22145	353 bp proximal
Gm67683	predicted gene, 67683	within coordinates
Plscr1	phospholipid scramblase 1	354 bp upstream
Rr206878	regulatory region 206878	within coordinates
Rr383753	regulatory region 383753	within coordinates
Tssr86494	transcription start site region 86494	191 bp downstream
Tssr86495	transcription start site region 86495	169 bp downstream
Tssr86496	transcription start site region 86496	129 bp downstream
Tssr86497	transcription start site region 86497	105 bp downstream
Tssr86498	transcription start site region 86498	168 bp upstream
Tssr86499	transcription start site region 86499	181 bp upstream
Tssr86500	transcription start site region 86500	203 bp upstream
Tssr86501	transcription start site region 86501	225 bp upstream
Tssr86502	transcription start site region 86502	266 bp upstream
Tssr86503	transcription start site region 86503	307 bp upstream
Tssr86504	transcription start site region 86504	337 bp upstream
Tssr86505	transcription start site region 86505	438 bp upstream
Tssr90887	transcription start site region 90887	614 bp downstream
Tssr90888	transcription start site region 90888	652 bp downstream