rs37087163 SNP Detail

Summary

• ID
  rs37087163
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:35355608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAACCTG GGAATACTTC
  CTCTGCATTA TTTCTCACAC CCTGTATTCT CTTCCTAACT GCTTTGTCTT AGAACAATCG
  GCCCTTTTGC TTTATTCAGT TGTAATAATT GTACTAGTTT TGTTTCATAT GATGCCGCTG
  ATTCCCAGCA TCTGATAAGA GATCTCATCA GAGGCTTGAG AGCAGATGTT TAGAAGGAAA
  M
  GTGGGACAGG AGACACAGAA ACTGGCTCTT TATCAGTCGC GTTTGACTGT TGCCAAGAAA
  TCGGACAGAA ACAACTGAAG GCAGGAAGGA CTTCTTCAGC TCACTGTGAA AGAGCTTCGG
  TCTCTATTGA CAGGGCTGGG GGAGGCATGG CAGAGGGCCC TGTTCATGGC AGTGGGAACA
  TCGGGGGTTG AGGTTGTTCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51091127	NES14361627	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	C	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37087163					SNP	A	A	A	C	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51091127	NES14361627	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:35355608 () rs orientation: forward

Symbol	Name	Function Class
Rr275746	regulatory region 275746	within coordinates
Rr275747	regulatory region 275747	993 bp proximal