rs37092330 SNP Detail

Summary

• ID
  rs37092330
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:50002788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAAAAATA TCATGATGGC
  TCTCTTTTTT TTTTTTCCTC ATGGCTTTGT TTCAGGTGTC TTTAGAAAAT GGGTACCTCA
  GAAGCTATCA GTATTTCTAA GAGTAGAAAC TAGCCTGTGC TTTTTTCAGT CATTGTTTTT
  GTTTCATCAC ACATAACTGT GAAACATTAG GATAATAAAA TGCTTCATCA ATAATGAGTT
  Y
  GCGGATACAT ACGTGTGATT GTAGATACAA GCATGTGTTC AGGCAGAGAG TGAATGTGGG
  AATTGTGTGT AACTATGTCC ATGCAACTTT TAGTATGGTC TATCCTTCCT GACAGCATTC
  ATAAAGGGCT GTATATGTGT ACCACTCATA CTAGCCCTGG CTCTCCCACA CCAACCATCA
  ATATAAACGA TTCCCAAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51109289	NES14348431	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37092330					SNP	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51109289	NES14348431	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:50002788 () rs orientation: forward

Symbol	Name	Function Class
Rr272328	regulatory region 272328	613 bp proximal
Rr286160	regulatory region 286160	1885 bp distal