rs3709301 SNP Detail

Summary

• ID
  rs3709301
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:91402701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCACAGAGG TAACACACTG GACAATTTCT CTTTCGTTCA
  CCTTGCCCCC TAGCCTGAGA CCTTCTCGAG TGCTGCGGGC ATGGCCATGA CAGCCTTGTA
  R
  CACAGAAGGG CTGTGGAGGA TCAATCACCT CTGGAGAACC CTTTCATGTC CCATGATGCC
  TGCTGCTCTG CTTCTGAGGC AAGAAGCCCA AGGACCCAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss5085547	WI_WGS_8_90425229	WI	MOUSE	f	SNP	A			G
ss145551838	ENSMUSSNP1925709	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs3709301					SNP	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91402701 () rs orientation: forward

Symbol	Name	Function Class
Gm17996	predicted gene, 17996	within coordinates