rs37094352 SNP Detail

Summary

• ID
  rs37094352
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:42111250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCACATAGT CTGGAATAAT
  GGGAAGAGCT CTTACTCCTG TGTCATCAGA TCTAATATAT TCTGCATCAG AAACTCAACA
  AAACAAAAAC AAAAACAAAT TTAAATGCTT GTAGGAAAAC CTACATTAGA TCCTCTCACA
  TCAGAAGCCC TTAATTTAGA ACCTAAATTT GCTCAGACAC AGGCGCTCTG ATACCTCGCA
  S
  TTGTTTACTC CATGAACTGA GCGGTCAGAG GTCCATCACT GGCCCACGGA CAGAAGCCAT
  TCCTTTCTGA TTTTGCCAAG TTGACCCTCT TCCTCCTCCT CCCATCTCAC GCCTGTTACA
  TCAGTCCTGA CCCTTGATGG TACCGTCTGA CAGATGATGC TCCCAGCAAC TACACACACT
  ACCTAGGACC CAAGTGCTGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss50819839	NES13535559	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37094352					SNP	G	G	G	G	G	G	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50819839	NES13535559	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:42111250 () rs orientation: forward

Symbol	Name	Function Class
Avpi1	arginine vasopressin-induced 1	464 bp downstream
Pi4k2a	phosphatidylinositol 4-kinase type 2 alpha	724 bp downstream
Rr547822	regulatory region 547822	264 bp distal