rs37094661 SNP Detail

Summary

• ID
  rs37094661
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:15875356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAACTACAAG TGTGTCCCAG GTCCAGGTAG GTGTTAGTGT
  AGGTAGGTGG GCCATTGTCT AGATTGGTCC TGAGCAAAGG TGAGTCTAGG TTCAGGTGGT
  Y
  CCTGGGCAGG TCACATGAGA AGAAGGGAGG GCTGAGCCTC AGGACTTCCT ATAAAGTCTC
  TCTTCCTTTC TATATGCAGA TCTGTAACAT GAGTATATGA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
ss51880917	NES14894032	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
rs37094661					SNP	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51880917	NES14894032	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:15875356 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi18356	CpG island 18356			220 bp distal
Slc8a2	solute carrier family 8 (sodium/calcium exchanger), member 2			Intron
				Noncoding-Transcript-Variant