rs3709614 SNP Detail

Summary

• ID
  rs3709614
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127542436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAGCACAGT GAGTGTTACA GGGAGGAAAG GGTCTCTACT
  GAGATCTTAA AAAATAAACA AACCCCATAA AATATAGCAT CTGGCTTCTC TAAAGGGCCC
  Y
  CTTTAAGCTC TATGTTCTGA TGACCCAATT TACCCTTTTA AAAGATAACT TTGTGGCAAC
  TGTTGCTTTT CTTTTTTTAT TTCAATTTTT TTATTAGAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J
ss5085860	WI_WGS_2_128681298	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J
rs3709614					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127542436 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr72	DNA Segment, Chr 2, Derry C. Roopenian 72	1992 bp proximal
Gm10765	predicted gene 10765	1429 bp upstream
Gm14244	predicted gene 14244	462 bp downstream
Tssr20034	transcription start site region 20034	1897 bp upstream