rs37098610 SNP Detail

Summary

• ID
  rs37098610
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:18707578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAATGGGA AATGATTTTG
  TTCTGTGCTT ACAACGTATC AGGCACTGTG AGAATGACTA ACTACATGGA TGAAGACGAT
  GATTCATGTA TGTGTGCGTG TTACACTCAC ACACACACAC ACACACACAC ACACACACAC
  ACACATGAGT AATTATATTT TCTCCCCACT TCTTCCAACC TACCTCTAGC TAAGCCAAAA
  R
  GAGGAACGGC TGATGAATCT GTGAGGACTT GCTGCATTGC AGGCCTTTAT GGAGTGTTTG
  AAGCTCACAC AGCGAGAGCC CTTGCTACAG GAGTGAACGA TGCCATGGAT GGACGAGGAG
  AGAGAGGCTA GATGTATTCA TTTACCTGTT CAGCAGCGCT CAGGTCATTG TCTTACTTGG
  GAGGGTGGGG AGGAACGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss50685056	NES13607284	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs37098610					SNP	A	A	A	A	A	A	G	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50685056	NES13607284	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:18707578 () rs orientation: forward

Symbol	Name	Function Class
Gm50202	predicted gene, 50202	1659 bp downstream
Gm59201	predicted gene, 59201	137 bp downstream
Rr544949	regulatory region 544949	954 bp proximal
Rr544950	regulatory region 544950	1141 bp proximal
Tssr155454	transcription start site region 155454	398 bp upstream
Tssr155455	transcription start site region 155455	416 bp upstream
Tssr155456	transcription start site region 155456	444 bp upstream
Tssr155457	transcription start site region 155457	1215 bp upstream