rs37099680 SNP Detail

Summary

• ID
  rs37099680
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58667742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCAGAATG GAACCTGTAG
  TGCCTGGCAG AAGTTAGCTG TCATTTCCTG TTCTTATGTG ATCTCTCTGA AATAAATTCT
  AATCACCTAG CAAGAGAGTG GATGTTTTAG AACAAACAAA GCCAGTTAGA AAGGCAGAGG
  GGAAAGGATA AATACATATA TACCAATTAT CCTATGTTGT GGCTTTTATA GTTTTGCGCC
  R
  TTTAATAATG AAACTGAAGG CTTAGCCTGA GGCTAATGGG ATGTACTGTT AACTTTCGCT
  GAGACACCAT TGCTGTCCCC ACCATTAAAA TCAGGAACAG AATTAGCTTT GACTCAATTA
  TAAGCCACAT TGGGAAAAAT ATGCCCTATT AAAAATCAGA ACACTCCCAG CCACCATTTT
  CTCAATTCCA CAGAATAAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss50903977	NES13492645	PERLEGEN	MM_PANEL2	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs37099680					SNP	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50903977	NES13492645	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58667742 () rs orientation: forward

Symbol	Name	Function Class
Pnlip	pancreatic lipase	within coordinates
Tssr157281	transcription start site region 157281	214 bp upstream
Tssr157282	transcription start site region 157282	232 bp upstream
Tssr157283	transcription start site region 157283	434 bp upstream
Tssr157284	transcription start site region 157284	724 bp upstream
Tssr157285	transcription start site region 157285	1424 bp upstream
Tssr157286	transcription start site region 157286	1495 bp upstream
Tssr157287	transcription start site region 157287	1512 bp upstream