rs37102602 SNP Detail

Summary

• ID
  rs37102602
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:71056862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCACAGG CCTTAAATTA
  TAGGTGTGGA TCAAATCACT AGCACCATGC CCATATTATC ATTATTATTA TTATTATTGT
  TATTATTATT AGGAACACAA TGGATTTGGG GATTCACGCC CAGTTTATGT GGTGTTAGGA
  ATGCAATGGA CTTCTGGATT CCTGTCTGCT AGACAAGCAC TCTACTGACT GAGCCCTAGC
  Y
  CTGGACCACG ATAATCTCTT AGGAGCAAAA GAAAATCTGC TTCAGAGGAA GCAATGTGAG
  ATGACCATAT GAAATCCCAC AAAGAAACAA AACCCCTATG GCATTTACAG TACACACTTA
  TGATCGCTAC TCCTCCATGA AGGAAGGCCA ATAGATTAAG CAATCAGATG ACTAGCTCCC
  AACATCTTGA GAAGATGGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50734990	NES14244236	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37102602					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50734990	NES14244236	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:71056862 () rs orientation: forward

Symbol	Name	Function Class
Aqp9	aquaporin 9	within coordinates
Gm32714	predicted gene, 32714	1252 bp upstream
Rr682494	regulatory region 682494	668 bp proximal