rs3710633 SNP Detail

Summary

• ID
  rs3710633
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  107
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108884340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ggaggcaggg gcaggcggat ttctgagttt gaggccagcc
  tggtctacaa agtgagttcc aggacagcca gggctacaca gagaaaccct gtctcgaaaa
  M
  ccaaaaaaaa AAAAAAAAAA AGTTATCCGC AGGTCGCCGT TTCCTCATTT GTTGAGGTAT
  CAGAAACCCC TCCCCTACAT CGGCTGTTTT GCCTGGAGTG                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J
ss5086880	WI_WGS_3_109473629	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J
rs3710633					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108884340 () rs orientation: forward

Symbol	Name	Function Class
Eeig2	EEIG family member 2	Intron
Gm65815	predicted gene, 65815	within coordinates
Rr583361	regulatory region 583361	726 bp proximal
Rr583362	regulatory region 583362	798 bp proximal
Tssr35213	transcription start site region 35213	526 bp upstream
Tssr35214	transcription start site region 35214	458 bp upstream
Tssr35215	transcription start site region 35215	438 bp upstream
Tssr35216	transcription start site region 35216	322 bp upstream