rs3710729 SNP Detail

Summary

• ID
  rs3710729
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127542589 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCA AAAGTCCCTT ATACCCTCCC
  Y
  CAACCCTGCT CTCCAACCCA CCCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	LG/J	MSM/Ms	SM/J
ss5086976	WI_WGS_2_128681451	WI	MOUSE	f	SNP			C	T
ss45315686	mCV22277879	ABI	CRAMUS_MOUSE	f	SNP	C	C		T
ss147538443	ENSMUSSNP3297082	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C				C
ss320500514	CHEV_2_127526405	CHEVERUD	SCREENING_POP	f	SNP					T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	LG/J	MSM/Ms	SM/J
rs3710729					SNP	C	C	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127542589 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr72	DNA Segment, Chr 2, Derry C. Roopenian 72	1839 bp proximal
Gm10765	predicted gene 10765	1276 bp upstream
Gm14244	predicted gene 14244	615 bp downstream
Tssr20034	transcription start site region 20034	1744 bp upstream