rs37119792 SNP Detail

Summary

• ID
  rs37119792
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:128847550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGGAAGT TCAGCCTGCA
  AAGACAGAAG ACAGAGCCAA GAGCAGATTG CAACAGAAGA CCGAGCTAAG AGCAGATTGC
  AACAAGGTAG GTATTGTATA AGGTCTAGCA TCCTTCCTAC CCTTTGGGAA TGCACCTGTC
  TTTTGACTGT GTCAAGGTGC AGGGCTGGCT GTAGGATGCA GACCCAAGGT ACCAGGTGCC
  S
  AGGTTGCTCA AAAGCTGAAG GGTAGGGATG GGGGTGGGGG TTTGTTTAAA GCAGTGGGAC
  TGGGGGTGTG GGCAGGGTCT GTTCTGAGTA AGCCTGAGAG AAACAATTTA GACTAAAGGC
  CATTGCCACC TCCTGGTGAG GCACAGGAAG TCAAGTAACT CTACACCTGG AACATGGGGG
  AACATTGGAG GACCATTGGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51843319	NES14704386	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37119792					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51843319	NES14704386	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:128847550 () rs orientation: forward

Symbol	Name	Function Class
Gm42875	predicted gene 42875	within coordinates
Rimbp2	RIMS binding protein 2	within coordinates
Rr621176	regulatory region 621176	997 bp distal
Rr621177	regulatory region 621177	803 bp distal