rs3712206 SNP Detail

Summary

• ID
  rs3712206
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:39252092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTACAGGT GCCAAGGGGT
  GGGACCAGCT CTCTCACTCT CACGAACTTG GGGTCAGCTC TTCCCGCTGT CTTAGGTGTG
  TGGGGAGCAC TTCCCTTGTA CGTAGACCAC CTCACAGCAG GCCAGTTCTC ATGTGCTCAT
  ACTGTCATGG CTCGCTCATT TCCATTGTGC CTGTGCCACC AGGGCCAGCT GTACTGTACT
  R
  CCCAGGTTAG GTGCAGGGCA CAAGCCATTT TTTTTGCACT GTCATGGTTT CTCCATGTAT
  TTTGGAGACT TGAGAAAGAC AGCCTAGCCA TCAGAGCCTT GTTTAAATTA GAGATGATTA
  TTTGGGCTAA GGAGAGAAGA GGCACTTCTG AGATAAAAAT GTTTTTAGTA GAATTTGGTT
  GACATGACTC AATAATTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	LG/J	SM/J
ss5088456	WI_WGS_13_38488656	WI	MOUSE	f	SNP	A	G
ss324322192	CHEV_13_39159985	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	LG/J	SM/J
rs3712206					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:39252092 () rs orientation: forward

Symbol	Name	Function Class
Gm60523	predicted gene, 60523	1028 bp upstream
Rr388296	regulatory region 388296	1197 bp upstream