rs37123223 SNP Detail

Summary

• ID
  rs37123223
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:69764147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCACCCCC CGACCCCCTT TGGGTGCGGA ATCTATTCCT
  TTGTTAAAGT TTCCTCTGCT CAGCCAGCAA CACAAGTGTG CCACAGAGTC CCTACTCTTT
  M
  TTCTGTACCA CCTGTTGGCC CTTTGACATT GCAGCTTATT AACCAGAAGT GGCTTTCCTC
  CTCAACCCCA ACCTGGGTGG GTTATTTACA TTTAGTTTA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51261964	NES14268072	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C
ss144642865	ENSMUSSNP3378297	ENSEMBL	ENSEMBL_Sanger	f	SNP								A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37123223					SNP	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51261964	NES14268072	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:69764147 () rs orientation: forward

Symbol	Name	Function Class
Gm70550	predicted gene, 70550	within coordinates
Rr371466	regulatory region 371466	131 bp downstream