rs37128547 SNP Detail

Summary

• ID
  rs37128547
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:113658856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGCTCCA ACCTGAGCAG
  GGCAGGGTGG AGAGGCAGGA GAACAAGGGC CCAGTGTGTA CCTGGCTCGC TCAGAGACTT
  GAATACAAGA GTGCCATGCT CCACAGCCTC CAGCCGGGCT CCCGGGGTGA TCAGAAAGCC
  ACTAAGTGGC CAGAGGCTGA AGCCTGACAG CCACGACGCT GCAGAGTGAC CCGGGGTGGA
  S
  CGTGTGCAGA ACGGGCCAAG GAGTAAGAAG GATGTGCCCT GTGGCTGATG GAATTGGCCT
  CAGGGCAAAG AGGACACCCA AGACTTATCC AGGTATCCAT GGAAACCCAA AGGTGGAGAC
  TTGAGCTTCC TTTCCCTGGC TGTGACTGTG AGTGGCCCTG GAGACAGCTG GGGTGTAAGA
  CACGGGTGGC TGGAAGTATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
ss51794400	NES14722573	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	G	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
rs37128547					SNP	C	C	C	G	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51794400	NES14722573	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:113658856 () rs orientation: forward

Symbol	Name	Function Class
Tssr48022	transcription start site region 48022	145 bp downstream
Tssr48023	transcription start site region 48023	85 bp downstream
Wscd2	WSC domain containing 2	within coordinates