rs37132262 SNP Detail

Summary

• ID
  rs37132262
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:92423857 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAATGACT TTGCATAGAC
  ATACTAATCA AAACCCAAAG CAGTGGAGGT AGCTCCCAGG AGACCAGGAA TGGCTCCTCT
  ACATCTTCGG AAGTAATTTT CCATGTGCCT GGCAGGGCGA TCTTGTTAAA GCACAGCCTC
  AGGTTGCCCA AGCTGGGCTT GGACTCCGTC GGGTTTACAA GCTTCATTAC TGGAAAGAGT
  Y
  TATGGCTCTC CTGGCACCAG CAGCGGCAGA GATGTTCACC GGACAATGAA AAGTTTCTGT
  TTACAGACTA AAATCAAAGC ATGGCCTTCC TTGACACGGT GATGGCGAAG TTCAGAAGGA
  ACAGCTGGGA GTGTGACAAG CGCCTACTCA GCCAAGCAGA CTGAAGCCCT CGCAGTCACC
  ACTCACCTCC GGGAGCGCCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	KK/HlJ	NZW/LacJ	PWD/PhJ
ss52036450	NES15053657	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	KK/HlJ	NZW/LacJ	PWD/PhJ
rs37132262					SNP	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52036450	NES15053657	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:92423857 () rs orientation: forward

Symbol	Name	Function Class
B430319G15Rik	RIKEN cDNA B430319G15 gene	within coordinates
Cpgi22147	CpG island 22147	53 bp proximal
Gm37545	predicted gene, 37545	1721 bp upstream
Plod2	procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	419 bp upstream
Rr684632	regulatory region 684632	within coordinates
Rr684633	regulatory region 684633	1114 bp proximal
Rr684634	regulatory region 684634	1241 bp proximal
Tssr86520	transcription start site region 86520	451 bp upstream
Tssr86521	transcription start site region 86521	626 bp upstream