rs37134669 SNP Detail

Summary

• ID
  rs37134669
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12568857 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGCCCATG CCTAGCTTCC
  GTTTTGTCCA AGTTCTTTTG CTCCTGTTAG TGGGTTCGAT TCTCTCCTAG CCTCGGTCTC
  TGTCCACAGA GGTACTGGTG CTCAGCGTCT TAGTATCCTT CTTCAAAAGC TGCATCCTAG
  TTCTTTAGCA GTCAATAACA CACTTTTCGG ACTTCGGCTT CGCCCGCCAA CAGGACAAAC
  R
  CCGCCTAACT GCTGCCGCTC GACGTCCGCG GGGGCGTCTG GGAGTTGTAG TCCGGACTCG
  TGAGCTGGCG CAGTTCGGGA CAAGACCGAC GGGCGAGCGC CATTGTGTCT TTCCGCAATC
  GTAGCGCTGC GTGAAAGCCC GTCGGGGGCA GCACCCATCT TCTGTTTTAT TTGCAACCTC
  TGGAACCCAG TGTCGGCTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51469413	NES13983788	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G	G	G	G	G		G	G	G	G		G
ss322106500	CHEV_7_13420279	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37134669					SNP	G	G	A	G	G	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51469413	NES13983788	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12568857 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18318	CpG island 18318	within coordinates
Rr642383	regulatory region 642383	159 bp distal
Rr642384	regulatory region 642384	within coordinates
Rr642385	regulatory region 642385	63 bp proximal
Rr642386	regulatory region 642386	564 bp proximal
Tssr64479	transcription start site region 64479	119 bp downstream
Tssr64480	transcription start site region 64480	43 bp upstream
Tssr64481	transcription start site region 64481	318 bp upstream
Tssr64482	transcription start site region 64482	1020 bp upstream
Zfp110	zinc finger protein 110	within coordinates