rs37139209 SNP Detail

Summary

• ID
  rs37139209
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:60957487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACCTGGAG AATTCCCTGT
  TTCTGCCTCC TGTCCCACTG CAAGCACACT GCAGTCAGGC ATGCCCACTG CCCACTGCCG
  TGTCTGCTTT TACTCCAGTT TGGGCTCTGA ACTGAGATCC TCAGGGCGGC ACAGCAAGTG
  CTTGCCCAGG CTCACCGTCT CCCAGCCTGA CTCAGTTTTC CACTGAGTGT GCCTGGAGTG
  Y
  TTTAAATGCA GCAAACGTGG CCACTTGTCA GGCACGTGGG TTTTAGTGAC TCTTGTCTTG
  TCACAGAGCT CTCTCACGTT CCCATGAAGT CACCTCTGGT TTTACTTTGT AGCTTCTGGG
  ACTATTGGAT TAAAGTGTTC CTCTACTTTG TTTCCTATAT TTTGTGCCTT TTAAAAATTT
  AGAATGTGGC ATTTTGGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss52025280	NES15042154	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs37139209					SNP	C	C	C	C	C	C	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52025280	NES15042154	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:60957487 () rs orientation: forward

Symbol	Name	Function Class
Gm33699	predicted gene, 33699	within coordinates
Gm39348	predicted gene, 39348	1194 bp downstream