rs37140971 SNP Detail

Summary

• ID
  rs37140971
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:44841864 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGGTGAC TCCTTAGTTC
  CTTGCTCTCC TCTGGCTCTT TGCTTCCTGA TCGCCTATGA TGTGAACGGC CCTCGACATG
  TATTTGCCAC CATGACACAT GGTGATCTGC TAGAATTTCC TGCCCATGAC AGACTAAATC
  CCCCTGAAGC TGTGAATTAC AGTGACTCTC TTCTCCCCTA AGTTGTTCCT GTGGAATACT
  R
  TGGACACAGA AGAACAGAAG TGATCAATAC AAAAAGCAAG GAGGAGGAGG AGGAGGAGGA
  GGAGGAGAGA GAGAGAGAGA GAGAGAGAGA ATAGGATTGA CATTGGCCTG TGGGCACTGA
  CACCAAATAT CTGGGTCCAA GAAGATCTTA ATGCAGACTC ACTAGAGTAA CATATCTAGA
  CTCAGTTACC AATTAGATAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50797999	NES13526754	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37140971					SNP	G	G	G	G	A	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50797999	NES13526754	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:44841864 () rs orientation: forward

Symbol	Name	Function Class
D19Mit27	DNA segment, Chr 19, Massachusetts Institute of Technology 27	254 bp distal
Gm5246	predicted gene 5246	1449 bp downstream
Rr394467	regulatory region 394467	within coordinates