rs37142285 SNP Detail

Summary

• ID
  rs37142285
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:59013876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTAAGTAA GAAGTATCTA
  CCAGACTTCA AAAATTCAGA AGAGCCTTGG CTGAGACTCA AGGCTATAGG AGGTGGATTG
  GAGAGACACA TCAACTACAG GTGACTTCCT GAGAAGAGTG CCACAACTAC TGGGAAAAGT
  CTGTTCTTCT GAACTAGGGG TGTGTGTGTG GGGACAATGG CATAATTTAC AGTTCCTCAG
  Y
  CCTTTGGTGT CATGGCAGAT TTCATCAATT CTTCATCTTG GGATGCTGAG GATTATGCTG
  AAAATAAGAC TCTTGGTTTG GGGAGAAGGC CAACTTGGGG AATAAGTTTC TTGCACAAAA
  TGGAATAAGA GAGTCTTTGC AGGGCAAACC TTCCTTGAGA AAGTAAAACA TCAGAAAGTC
  TGTGTCACAA CTTTGTCCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51665175	NES14830110	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37142285					SNP	T	T	T	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51665175	NES14830110	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:59013876 () rs orientation: forward

Symbol	Name	Function Class
Gm19165	predicted gene, 19165	within coordinates