rs37146440 SNP Detail

Summary

• ID
  rs37146440
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58667604 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTTTCTTC ACATGCCAGA
  TACCTGGCTA AATCTTAATG GCCAACTGGG CCATTTTCTC TCCCTACTGA TTCACATTCT
  GAGATGTGAG CATGTGCCAA GTGATGCTAA GGAAATGGAG AAGGGTTTGA ATTTTGAGCC
  TCAGAATGGA ACCTGTAGTG CCTGGCAGAA GTTAGCTGTC ATTTCCTGTT CTTATGTGAT
  S
  TCTCTGAAAT AAATTCTAAT CACCTAGCAA GAGAGTGGAT GTTTTAGAAC AAACAAAGCC
  AGTTAGAAAG GCAGAGGGGA AAGGATAAAT ACATATATAC CAATTATCCT ATGTTGTGGC
  TTTTATAGTT TTGCGCCATT TAATAATGAA ACTGAAGGCT TAGCCTGAGG CTAATGGGAT
  GTACTGTTAA CTTTCGCTGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss50903983	NES13492642	PERLEGEN	MM_PANEL2	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs37146440					SNP	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50903983	NES13492642	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58667604 () rs orientation: forward

Symbol	Name	Function Class
Pnlip	pancreatic lipase	within coordinates
Tssr157280	transcription start site region 157280	1955 bp downstream
Tssr157281	transcription start site region 157281	352 bp upstream
Tssr157282	transcription start site region 157282	370 bp upstream
Tssr157283	transcription start site region 157283	572 bp upstream
Tssr157284	transcription start site region 157284	862 bp upstream
Tssr157285	transcription start site region 157285	1562 bp upstream
Tssr157286	transcription start site region 157286	1633 bp upstream
Tssr157287	transcription start site region 157287	1650 bp upstream