rs37153443 SNP Detail

Summary

• ID
  rs37153443
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127765114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTTTAGA TTAGAGATAT
  TAATTTATTT GTACATTTTT GTGACAAGTG GAGTGTTGAA AAAAAAAAAA AACCATACTG
  TTAACTACGT GGTGAGGTGC ATTCTATACA ACCTTAATAA CTAGTGACAT GGGTTAAACT
  TGGGGATGCG GGGTACTGTT CTCTACTTTC CTGCTGCCTT GAGATAGATC GCAGAAATTC
  Y
  AAATCAGAGT ATTTCCTAAG TTTCACCCGT GTCCGTGTAT TGGAAATTAC ATGTAGAAAA
  ACTACGGCTA TTTCTCAATA TTGTATCAGA AACTTTTGTT TTATCTGGAT GTCCAACTTC
  TACTGCCCAT TCCTTTTCGT TTACAGACTA GTTGCTTCTG CTACTTTATA AACACTCTGG
  TCATAACTCT TTTCACAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss51616691	NES14661298	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs37153443					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51616691	NES14661298	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127765114 () rs orientation: forward

Symbol	Name	Function Class
Gm35667	predicted gene, 35667	within coordinates
Rr52	regulatory region 52	within coordinates
Rr584913	regulatory region 584913	254 bp distal
Rr584914	regulatory region 584914	370 bp distal