rs37156506 SNP Detail

Summary

• ID
  rs37156506
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:70848491 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGCCTCC TTGACCACCA
  GGCATACACA TTGTACACAG ACATATGCTC AGGTAAAGGG CCCATACATG TAAAGTAGAA
  CAATAAATAT ATAAACTTTT AACTTAAGAA AAGGGATCTG AAAGAAGCCC CTTCTGTGGT
  GTGAGGAATC AGACAGAATG TATGTATGTG GACTCCCTCT ATAAAGTTAG TCTTTGGGTC
  K
  ACCTGAGATG TGAACTCTTA CGTTCTTACG AACCATCTGG CCAAGTGTCA GTAGTTATTG
  GAAATCAATA CACGAGGGCT GCCGCACTGG CCTCATTACA TTTCAGACGT TCAGAATACT
  TCACAGTAAG TTAAAGTTGA GTATGTGGGC ACACAGGAAG TGAAGACGAC AGCCAGGACT
  GCACAGAGAA GCCCTGTCTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51674859	NES14816762	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	G	G	G	G	G	T		T	T	G	T		G
ss321816287	CHEV_6_70821501	CHEVERUD	SCREENING_POP	f	SNP										T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37156506					SNP	G	G	T	G	G	G	G	G	T	T	T	T	G	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51674859	NES14816762	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70848491 () rs orientation: forward

Symbol	Name	Function Class
Eif2ak3	eukaryotic translation initiation factor 2 alpha kinase 3	Intron
Rr399692	regulatory region 399692	720 bp upstream
Rr631848	regulatory region 631848	within coordinates