rs37158576 SNP Detail

Summary

• ID
  rs37158576
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:31466978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACGAGAAG CCAGAATAAG
  CACTGCAGCA CCACATGCAA GAAAGCACTC AATCCCTCCC GCCCCTCTTT ACAGAGAAAG
  ACGGTACAAA AGGTGGTTCC CCCTCCCAAC CCTTACTAAG AAGGGCAAAG GTCAGCTATA
  GACAACTTGA ACCTTTGTAG ACCTACCTAG AAAGGACCAG AGAAACCTCA TTATACAATG
  Y
  CCCCAGGCCT TCTAAAACAG GGTCTCATAT GACCCAGTTG TCCCCAAACT AGCTATATAG
  CTGAGGGTGA CTTTGAATAC AAGAGCCCCC TGCCTCCACA TCTCAAGTGT TGCAACTGAA
  GGGATGAAGC AGTAGACATG GCTATTAACT AGACTTTATC AACATTTGTT CCTCTTCTCC
  CAGTAGGCGG GCTGCAGTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51630472	NES14594917	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	T	C	T	C	T	T	C	T	T	T	T	T
ss147445810	ENSMUSSNP4244139	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37158576					SNP	C	C	T	T	T	C	T	C	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51630472	NES14594917	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:31466978 () rs orientation: forward

Symbol	Name	Function Class
Marchf6	membrane associated ring-CH-type finger 6	within coordinates
Tssr133930	transcription start site region 133930	1075 bp downstream
Tssr133931	transcription start site region 133931	1106 bp downstream
Tssr133932	transcription start site region 133932	1139 bp downstream