rs37163084 SNP Detail

Summary

• ID
  rs37163084
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127723232 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGATGCCT TAGGTGCTTC
  CAAGGGGCAG GCCTCCAGAG CAGGACAAGT CTAAGTGAAC TTAGGCCTCA GCTACCTGAC
  AGGCACAGAG CGTGGTTTTC CAGTGAGTGA CCACCTTACT CCAGAAAGGA GAAGGTAAAG
  AGAGCCTTCC AAACCAAAAA GAAAAGACTG TTCATGAGGG GTTCTCAAAG GTTGCAATTA
  W
  AATAAAACAC TTCGCTGAAG GGTCCCCACG GGACCTCAAA ACCATCTAAT ACCTGAGGGA
  GTCTGAGAAG GCCTCTACAC CATACTTGGA GATGCAGTAA CCACCACCAC ACAAAGACAC
  TCGACCCATG GAGCTGGAGA TGTTGACCAC ACGGCCCCTC GCCTTCCTCA CTAAGGGCAG
  CATGCTCAGA GTCACCTCGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	FVB/NJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss50946001	NES14148140	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T		A	T	A
ss323530329	CHEV_10_127324419	CHEVERUD	SCREENING_POP	f	SNP						T				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	FVB/NJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs37163084					SNP	T	T	T	T	T	T	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50946001	NES14148140	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127723232 () rs orientation: forward

Symbol	Name	Function Class
Rdh7	retinol dehydrogenase 7	within coordinates
Rr226506	regulatory region 226506	88 bp distal
Rr226507	regulatory region 226507	1160 bp proximal
Tssr99826	transcription start site region 99826	1281 bp downstream
Tssr99827	transcription start site region 99827	1325 bp downstream