rs37164405 SNP Detail

Summary

• ID
  rs37164405
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33151816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAGTCACT TAGTCTGCTA
  GCTGTGCCCA GGTCCAAGAT ATTCACAGCC TTCAAAAACA GTGCCAACGG ATTCGGTAAT
  CAAACACACA TGTGGGAGAC GTTTCAGGGA CTGAGGGCAC ACAGGGATGA TGTCGGGGGA
  GATGGTATGT GTGGAGAATC TCTCCGTGCC CATTAGCAGA GCACATCTGT CCTGTAATGC
  Y
  GACAGTGCCT AGCAGCACCG CTTTATGTTG CTATGACAAT GTATGAGAGC TCCTATTCCT
  CCACACACTT GGGAGGACTC CTCAATTCCC GTGGGTCGCT TCTCCCTCTA ACTGTTTATC
  AGTCATCAAA TATTACATAT TTGTTAAACT AATCATTTTC TTACAGTCTG CATTTTACAT
  CTCCCATAAA CATGCCCCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss50968359	NES14415359	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs37164405					SNP	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50968359	NES14415359	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33151816 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	896 bp upstream
Rr464869	regulatory region 464869	406 bp proximal
Rr464870	regulatory region 464870	907 bp proximal