rs37166638 SNP Detail

Summary

• ID
  rs37166638
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:86844415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCGCAGC CCAGCCACTG
  CCCAGAATCA GATGCAAATG CTGCAGTAGG AGAACAAAGA TAACCAGTCC AGTCATCCCA
  AAAGACACTG GAGACCGCTG ACTCAGCTGT GTCTTCAGGA GCTTCCAGGT TATATAAACC
  AGATAATGGG TAGGAGAGTG AATATACATC ATTTCTAATG TAGTTTTGAC CAAACTGTAG
  Y
  CTGATTGATC TTTACAGTTA ATCTGGGCGT TGTCTCCTTA GGAAGGGCGC TGATGCATAA
  GGCATAAATA GATTAAGCTC TTGATCAAAG CAGCCCGGTT TTTGTTTAGT TATCCATGGG
  CATTTAGTCG AGCAGCCTCA CAGTCCTAAT TACAGTCAAG TCAGGGAGAC TCTTACATGC
  TGTACAGCCC TCTAAATCGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51291914	NES14516765	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37166638					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51291914	NES14516765	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:86844415 () rs orientation: forward

Symbol	Name	Function Class
Dis3l2	DIS3 like 3'-5' exoribonuclease 2	within coordinates
Gm37967	predicted gene, 37967	1299 bp upstream