rs37167425 SNP Detail

Summary

• ID
  rs37167425
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129053290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGATTCA TCCATTAACT
  GATTCATTAT TTGATTGCTT TATTGGGAGA TGAGTCCTAG TTAGAGGAAA TAGACCGCCG
  TGGGGCAGAC CTATGAAGAA TGAATATCAT GTCCCTTTCA ATCCACCCCC CCCTTCTGTC
  CCTGTGCTGT AAGCCACCTC AGCACATTTT ATAGCACATT AACATTCTAT TGACCATGCA
  Y
  GGAACCATGG TCTGAAAACA TAAATCAAAA TAAGCATTTC CTTTTTTTCA AAGTATTTCT
  CTCAGGCATT TCATCAGTGC AACAAAAGTC TGCCTAGCAT AGAAAAATGG CGTCTTACCT
  GGGGGCTGAT GTGACTACAC GCTTGTCAAA GGTTCAGTGT TCCTGCTCAT GGTTTGTGGG
  AGGAATTTAG AAAAGTTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ
ss51624449	NES14657210	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ
rs37167425					SNP	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51624449	NES14657210	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129053290 () rs orientation: forward

Symbol	Name	Function Class
Gm65501	predicted gene, 65501	within coordinates
Rr584980	regulatory region 584980	954 bp distal
Rr584981	regulatory region 584981	894 bp distal