rs37168617 SNP Detail

Summary

• ID
  rs37168617
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27751950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGTTTTC TGCAGGCTTC
  TGGCCTCCCG TTACTGGAGT TCTTCAACCC CGCTGGCCAC TTTTTAGTTC ACGCTGTTGC
  CCCTTTGTCT TTTCGCAGAA CTTTGTGTTG AGCACAAAGT TTCACAGAGA GTTGAGTCCT
  TTTAGGCGAG GTGTGAATCA GGGTGTATTT TTTATTTTTA TTTTTTATAG GCACCGATAC
  R
  GACCTAAAGG CTCTGGGAAA CGTTTATTTT CTCTCTTGCC CGTCCCTTTC TGGATGAACA
  GGTTAGCTGG GTAGCAATAG CCAGTACTGT TTGTAATGCA CTCTGATCCA CTTCTCACTG
  TGGTCTGCGA AGTGTCCGTT GGCAGACCAG GTAGTTCCCG TTGTCTTTGA AGAGGAAGGG
  GTTTCCTTAG AGTGTAGCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss51947115	NES14964421	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs37168617					SNP	A	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51947115	NES14964421	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27751950 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	295 bp distal
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	within coordinates
Rr186444	regulatory region 186444	within coordinates
Rr186445	regulatory region 186445	1250 bp proximal
Tssr76776	transcription start site region 76776	1590 bp downstream
Tssr76777	transcription start site region 76777	1552 bp downstream
Tssr76778	transcription start site region 76778	1504 bp downstream
Tssr76779	transcription start site region 76779	1460 bp downstream
Tssr76780	transcription start site region 76780	1413 bp downstream
Tssr76781	transcription start site region 76781	489 bp downstream
Tssr76782	transcription start site region 76782	824 bp upstream