rs3717032 SNP Detail

Summary

• ID
  rs3717032
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161323319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CACATGTCT GTTTGGGAAG CCCCTGATGG
  TTATCAGGAA TTTCCCATTG AACTCTAGTG TAAATTGTGG GTCTAGATGG GATATGAACT
  GGAAATGTAT ATCAATTAGG TTTTTCTAGA AGTGTTCTCT CATACAGAAC AGCCAGGGCT
  R
  CAGAGAGAGA GAGAGAGaaa aaaaaacagc aaaaaccaaa ccaaaacaaa cagacaaaaa
  aaaaaaaaaa caacaaaaca aaacaaaaca aaaaaaacca aaaAAAGCAT TGACCAGAAA
  AGCCAGAAAG GAATCAAATA TTAAATAAGA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5093292	WI_WGS_1_162673282	WI	MOUSE	f	SNP	A	G
ss145915216	ENSMUSSNP4483848	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
ss320080918	CHEV_1_163425881	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3717032					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161323319 () rs orientation: forward

Symbol	Name	Function Class
Tnfsf18	tumor necrosis factor (ligand) superfamily, member 18	within coordinates
Tssr9690	transcription start site region 9690	1094 bp downstream