rs37170356 SNP Detail

Summary

• ID
  rs37170356
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128049089 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTTTTTTT TTCCCCTTCT
  AATTACAAAA CTACTTTTAA TACTTTGAGG TATGTCGCAT ACCTCAAAAC TGGGAAGAGT
  AACCTCACTT TCCAGGAGTG GCCCAGGGTA AGAGAGGAAG GAAACACGAG AGGGACCTGC
  TGCAGACTTG CAAATGCCGA AGGGAAGGAA CTGTATAGCA CGGTGGGAAG GCTCTGGCGC
  R
  TAGGCGAAGA CCAAGAGGGT TGGTCACGAA GCCGTTCTCG TTTGCCTTTT TCTGTTTCTG
  CTGCACGACC TCCGAGTCTC TCCGCCTGCG GGCGGCAGAG GAAACCAATC GTTATCCCGG
  CGCTTCCCCT TAACCGAGTC GCTCTCCTTG CTCTGGGAGA GCTCGCACTC AGGTACCGCG
  GTCCTGAAGC AGCTCCCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50948627	NES14143202	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37170356					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50948627	NES14143202	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128049089 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2387	CpG island 2387	1166 bp distal
Cpgi2388	CpG island 2388	within coordinates
Rr213664	regulatory region 213664	1712 bp proximal
Rr224447	regulatory region 224447	888 bp distal
Rr224448	regulatory region 224448	within coordinates
Rr402345	regulatory region 402345	1209 bp downstream
Rr402346	regulatory region 402346	116 bp downstream
Spryd4	SPRY domain containing 4	1426 bp upstream
Tssr99849	transcription start site region 99849	1445 bp upstream
Tssr99850	transcription start site region 99850	1397 bp upstream