rs37170733 SNP Detail

Summary

• ID
  rs37170733
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90886401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAGGCTT TTCCCAGTCC
  ATGCTGCTTC TCTGCTTCAT TTAGCTCTCT GTGCTGGTCA CAAGGAAGCT GAAAGGGACA
  GCCCAGGAGG AGCAGGCACA CTTGGCTCAG GGCATCCAAG TATCTGGGTA TCAGGTAAGG
  TAGGGCTGAC AGTCTTCTGG GAGCCATTTG ACACTGGATC TTCCCTGAGA CAGTTCTCAT
  Y
  AGCTTTGGCA AGCAGTGATT ACAGAGAAAA CCAACGCCTG GAAGCCTCCA GGGCTCAAGC
  ATAAGCCATC TCCGACACAG AACATGAATG GACAAAGAGG CAGCCCCGGC AGATTTGCCA
  CAAAGACGTA GTAGCTTGGG CTGGGGACCC TCTGAAGCAC AGGCTGAGAT GTGTCCTCCG
  CCAGCTCTCC TGCAGTGGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
ss51301114	NES14511552	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
rs37170733					SNP	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51301114	NES14511552	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90886401 () rs orientation: forward

Symbol	Name	Function Class
Rab17	RAB17, member RAS oncogene family	within coordinates
Rr415504	regulatory region 415504	1530 bp distal
Rr415505	regulatory region 415505	1776 bp distal
Rr415506	regulatory region 415506	1629 bp distal