rs37171865 SNP Detail

Summary

• ID
  rs37171865
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:78002616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGATGCT GCCAAAGCTA
  TGTTAAGCCA GGGATAGTCT GTTCCAGAAT GGAAAACCAT CTCTTTGATA CCAGAAGAAT
  AAAGGAGATC CTAGCAGAGA GAAACAAGCG ATGTTCACTC CAGGTGGCTT CTTTGATCAC
  TAAATATTAT ACAGTCTCTT CCCTTTTATC TAAGCCAACC CACAGACCAC CAGGAAGCCT
  R
  TGTTTTCTCT GCGATACTGC TTGTGTGATC ACAGATTGTT TCTTCGCTGT CTTACCTGCC
  CTGCTCTAGC ATTTACGTTT TGTCCATTCA AAGCCATATC TTACCCAACA CTGTCATTCC
  AGGTGAGTGT TTTTCATGTG TGATCTCTAG ACCAGGGGCA TTAGCATTTC ACACAGACTT
  GTTAGGCTTG CATCTTCATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51286148	NES14517137	PERLEGEN	MM_PANEL2	f	SNP	A		G	A	G	A	G	A	G	G	G	A	G	A	A	G
ss144739040	ENSMUSSNP7246270	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37171865					SNP	A	A	G	A	G	A	G	A	G	G	G	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51286148	NES14517137	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:78002616 () rs orientation: forward

Symbol	Name	Function Class
Gm70314	predicted gene, 70314	1560 bp downstream