rs37174231 SNP Detail

Summary

• ID
  rs37174231
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:109679111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGTGTCC CGGTCTTCCT
  ACTGCTGCTG CTTGGTACTT GGAGAGAGGT GGTCCGTGGC GCGTTCGCTT CATTTATGGC
  GCACATTACA CGGTCGACCT CTTTGCGGTA TCTAATCCCG CCTTGCGAGC TTTCCTGGAG
  CTAACACCAG CTGTGGGGTG GGGACACTAA ATGTGTGTGC TAGCGCAACC CAGCCAGCGG
  R
  TTTGTCTTTT CTTGTGTCTG ACAATAACTC TTGTGTGGCA GCCTTCTTCT CAGCAAATTT
  CTCTGGCTTG GCAGCTTCGT GGGCAGGGTG ACTTGCAGAC CAGGAAAGTG GCATCGACAT
  GTGATACACG TGTGGGTGCG TGAGGTGGTT GACCAGAGAG CACACGCTAT ATTTGTGCCG
  TTTGTGACCT GGTCCACTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51053017	NES14374820	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37174231					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51053017	NES14374820	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:109679111 () rs orientation: forward

Symbol	Name	Function Class
B830012L14Rik	RIKEN cDNA B830012L14 gene	within coordinates
Gm54365	predicted gene, 54365	787 bp upstream
Mir299a	microRNA 299a	1977 bp downstream
Mir299b	microRNA 299b	1984 bp upstream
Mir323	microRNA 323	84 bp downstream
Mir329	microRNA 329	804 bp upstream
Mir380	microRNA 380	814 bp downstream
Mir758	microRNA 758	133 bp upstream
Mir1197	microRNA 1197	241 bp downstream
Mirc6	microRNA cluster 6, including Mir379 through Mir544	within coordinates
Mirc36	microRNA cluster 36, including Mir379 through Mir3072	within coordinates
Mirc44	microRNA cluster 44, including Mir1197 through Mir758	within coordinates
Rr262534	regulatory region 262534	within coordinates