rs37176980 SNP Detail

Summary

• ID
  rs37176980
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:26679195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGGGTGG TTGATCTCCT
  TTGTAATCTC CCAATGTCTT CCATGTTTTG GAAAGTTCTG AGCTCCATCA CTCTCTGACT
  CTCACTTAGC CACAGTCCCA TTCCTTACCC TCTTGAGACC CTTTGCCTAA AGTTACATGA
  GAATGGACTC CGTTGATATT CTACAACTTC CATGTTCTCT TTCTTCTCGA CTCTTAGGAA
  R
  TGTCTAGAGG CTGAGATCTA CCATTTTACC TGCCCTTTTC TGGCTAATTG CATGTCACTC
  CCTCAATCTT AAGTTAGAGG ACATCACCCA GAGAAAACTT ACTGTGCTCC AAATATAGAT
  CAACTGTTTT CACAATGGTT GCTCTGTTTC TCTGTGTGGC ATCACAACCT CCATCCTCCT
  TACATGTACA CATAGGAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51442670	NES14434693	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	A	A	G	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37176980					SNP	A	G	G	A	A	G	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51442670	NES14434693	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:26679195 () rs orientation: forward

Symbol	Name	Function Class
Gm55656	predicted gene, 55656	1139 bp downstream
Gm65182	predicted gene, 65182	within coordinates