rs37177111 SNP Detail

Summary

• ID
  rs37177111
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58668256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTTCGCAC GTAAGTTTCC
  GTTTTATTTG ATTTTCACTT TAGCTCTCCT ATTGGGCAGG CATGGATGGG GCAGGGTGTG
  AGACCCAGAG CCTGATAAAT GCCAGCAAGT GCTCTCTGCT ACTGAGCTAC TACGTCCTAG
  CTGCAGATTT CAACAAGACA GATTTCTTAG GCTCTTGGCT TGGAAAAAGT AAAACCAACC
  Y
  AAATCTCCTT ATTCATTGAC TCTGGAAATG TTCCCTAAGT CCACACTTCC CAATGCCTGG
  CCCTGAACAC CGACGAAAAC AACTGTGGGA TTTTGCCAGA TCCACACCCG ACATGGTGGA
  TCATTCACGT TCTGCCCCTG CTGGGGTGTG TGTTAACCTG TAGTCAGAAC CTCTTCCCTC
  CCAGCTAACA GTGTACAAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss50903973	NES13492647	PERLEGEN	MM_PANEL2	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs37177111					SNP	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50903973	NES13492647	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58668256 () rs orientation: forward

Symbol	Name	Function Class
Pnlip	pancreatic lipase	within coordinates
Tssr157281	transcription start site region 157281	287 bp downstream
Tssr157282	transcription start site region 157282	267 bp downstream
Tssr157283	transcription start site region 157283	75 bp downstream
Tssr157284	transcription start site region 157284	210 bp upstream
Tssr157285	transcription start site region 157285	910 bp upstream
Tssr157286	transcription start site region 157286	981 bp upstream
Tssr157287	transcription start site region 157287	998 bp upstream
Tssr157288	transcription start site region 157288	1922 bp upstream
Tssr159962	transcription start site region 159962	1960 bp downstream