rs37178799 SNP Detail

Summary

• ID
  rs37178799
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103959255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTACTGTG AGCTCTGGCT
  TCCGGTTCAG GCTACTGTGT AGGCCATTGT GTTCTCCAAA GGTCACGTCA GATATGAGTA
  ATGTGTAAAT TTACAACAAC AACAAAAAAC TTCAGTGGGG AGAAAATTTG AGTATCACAT
  GAGTTATGAC TCTTGTACAG AGAAGGTCAG TGAGAGAAGA TGTGATGGTG GCAGGAGAGT
  M
  GGGAGAAGCG CGTGGTGGGA AAGACCACGG TGCGCCTGCA GGAAAAGCAA GCCAAAATCC
  TCTGTTGAAG ACTGAAAAGT CTTCTCCCTT TGTTTAGTCT CGGGGCCACC CAGGGAATGG
  TGACACCTGG TTCATCCAGG GCGGGTCTTC CCAACACAGA TAGATCTTTC TAGAAATGTA
  CACATGACCA CACCCAGAAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50790747	NES14207035	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37178799					SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50790747	NES14207035	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103959255 () rs orientation: forward

Symbol	Name	Function Class
Acad11	acyl-Coenzyme A dehydrogenase family, member 11	within coordinates
Rr383851	regulatory region 383851	1644 bp upstream