rs3718068 SNP Detail

Summary

• ID
  rs3718068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:50963806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCC TAGCGTTTAG CAGACTGCAG
  R
  TGCTACTTGA ATGTTACAGT TTTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss5094338	WI_WGS_2_51577189	WI	MOUSE	f	SNP	G						A
ss38079466	NES09345648	PERLEGEN	MM_PANEL2	f	SNP			G	G	A	G		A	G		G	G	A		G
ss146549418	ENSMUSSNP4309678	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss320293400	CHEV_2_50929314	CHEVERUD	SCREENING_POP	f	SNP										G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs3718068					SNP	G	G	G	G	A	G	A	A	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38079466	NES09345648	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:50963806 () rs orientation: forward

Symbol	Name	Function Class
Gm32360	predicted gene, 32360	within coordinates
Rr556806	regulatory region 556806	999 bp distal
Rr556807	regulatory region 556807	413 bp distal