rs37182771 SNP Detail

Summary

• ID
  rs37182771
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:15895668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATACTGGG AACTGTACCC
  TGCCGGGTCA ATGTTCTTAA TCTCCAAGCC GTCTGTCTCT CCAGCTCCTG ATTTATAATT
  TTAAGCATTC CTCATAGACT CCTGTGATAT CAGCGACTTC CTGTGATATC AGAGGTTGGA
  AATCAGGAAC TCAGGCAGGA GAAGAGGAGT GGAGGCTGGA CTGGGTGTTG GAAATCAGGT
  M
  ACAGATCAAG CCAGTGAGAA GGCACAGGAA GACCTATCGG CTGGAAAGAG GTGGTGACTG
  AGGGGGAATT TAGGGAAAAG ACCTTAAAGT GACTCGGGTA GGGACAGGGA AGGTGCCCAT
  GCCACCACAG GGCTGGGTAC AAAGGAAGCA GCTGCCCTCC CTGGACACAA GATGAGCAGA
  GGCTGCAGTG GCCCATCGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51880836	NES14893706	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	C	A	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37182771					SNP	C	C	C	C	A	C	A	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51880836	NES14893706	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:15895668 () rs orientation: forward

Symbol	Name	Function Class
Rr155078	regulatory region 155078	68 bp distal
Rr160786	regulatory region 160786	333 bp proximal
Rr164335	regulatory region 164335	724 bp distal
Slc8a2	solute carrier family 8 (sodium/calcium exchanger), member 2	680 bp downstream
Tssr64587	transcription start site region 64587	1549 bp downstream
Tssr64588	transcription start site region 64588	1533 bp downstream