rs3718649 SNP Detail

Summary

• ID
  rs3718649
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:50963873 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTC ATTCAGGGTG ATTTCCCATT
  Y
  CGCTGAAATA ACACTCTCAA TTTCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss5094925	WI_WGS_2_51577256	WI	MOUSE	f	SNP	T			C
ss146549426	ENSMUSSNP1290401	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss320293401	CHEV_2_50929381	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs3718649					SNP	T	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:50963873 () rs orientation: forward

Symbol	Name	Function Class
Gm32360	predicted gene, 32360	within coordinates
Rr556806	regulatory region 556806	1066 bp distal
Rr556807	regulatory region 556807	480 bp distal